Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQTNEILAKANVLVDDVNGKVSTIDPLFVAIADLSESVSDLNLQARHIGQKASSATSSVTKAGSALAIGKAASKIFRKKGDKK |
| 2KK4 Chain:A ((1-95)) | -----------------QGHMDLICMYVFKGEESFGESIDVYGDYLIVKVGTEFLAVPKKSIKSVEDGRIVIGEFD--------------EEEARELGRKWLEEKSKPVTLEELKSYG------FGEEGEGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10410 for 616 contacts (16.9/contact) +
2D Compatibility (PS) -9662 + (NN) 3689 + (LL) 4836
1D Compatibility (HY) 800 + (ID) 700
Total energy: 9373.0 ( 15.22 by residue)
QMean score : 0.178
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