Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYGRIVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQSALLAYQEVYGQLSSPYMVVGNVHDFNDGLNLSYQLVKEVSIDGILATSDEVAAGLIKGYEESRKKCP---YIIGQECLLVGQL--LKLPTIDHKSYYLGKLAFKQALAEKI----SQEVLFSEFLSQDN |
| 3JVD Chain:A ((64-322)) | ----------------------------------------------------------SALVGVIVPDLSNEYYSESLQTIQQDLKAAGYQMLVAEANSVQ-AQDVVMESLISIQAAGIIHVPVVGS-----IA-EGIPMVQLTR----PGFPRVLCDDEAGFFQLTESVLGGSGMNIAALVGEES--LSTTQERMRGISHAASIYGAEVTFHFGHYSVESGEEMAQVVFNNGLPDALIVASPRLMAGVMRAFTRLNVRVPHDVVIGGYDDPEWYSFVGAGITTFVPPHEEMGKEAVRLLVDLIENPETGDVVLQGQVILRGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144096 for 2035 contacts (-70.8/contact) +
2D Compatibility (PS) -26354 + (NN) -10551 + (LL) 5592
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -184159.0 ( -90.50 by residue)
QMean score : 0.510
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