Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR
2DT5 Chain:A ((2-203))
-----KVPEAAISRLITYLRILEELEAQGVHRTSSEQLGGLAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFG-ESFELRGFFDVDPEK-VGRPVR-GGVIEHVDLLPQRVP-GRIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSFAILNPK
General information:
TITO was launched using:
RESULT:
Template:
2DT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149515 for 1456 contacts (-102.7/contact) +
2D Compatibility (PS) -22219 + (NN) -10716 + (LL) 732
1D Compatibility (HY) -18400 + (ID) 3550
Total energy: -203668.0 ( -139.88 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2DT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DT5-query.scw
PDB file :
Tito_Scwrl_2DT5.pdb
: