Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQVFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPTGEDRFAIISGQKKMFDFEEGYFYPAKESIDFYHHYKEDLALLAEMGFKTYRMSIAWTRIFPKG-DELYPNEAGLRFYENIFKECRKYGIEPLVTITHFDCPIYLIKHYGGWRSRKMIGFYERLVRALFTRFKGLVKYWLTFNEINMILHAPFMGAGLYFEDGENQEQIKY------QAAHHELVASAIAVKIAHEVDPNNQIGCMLAAGQYYP-NTCHPQDYWAS-MQKNRENYFFIDVQTRGKYPNYAKKYFEHL----GISIQMTAEDLALL---RDYTVDFISFSYYSS-------------RVASGNPTVSEQVQENIFASLKNPYLKSSEWGWQIDPLGLRITLNAIWDRYQ--KPMFIVENGLGAVDIPDENGYVEDDYRIDYLRQHIAAMRDAIYVDGVNLIGYTTWGCIDLVSAGTGEMEKRYGFIYVDRNNKGEGTLKRYKKKSFYWYKKVIASNGSQIE |
| 1PBG Chain:B ((1-464)) | -MTKTLPKDFIFGGATAAYQAEGATHTDGKG-------PVAWDKY-----------LEDNYWYTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEV--NEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPI------GDGQYLV-GKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLN-DFLGINYYMSDWMQAFDGETEIIH--------SKYQIKGVGRRVAPDYVPR----WIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-VYDDGRIDYVKQHLEVLSDAI-ADGANVKGYFIWSLMDVFSWSNG-YEKRYGLFYVDFD-----TQERYPKKSAHWYKKLAETQVIE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236023 for 3546 contacts (-66.6/contact) +
2D Compatibility (PS) -44176 + (NN) -11084 + (LL) 2712
1D Compatibility (HY) -28800 + (ID) 8450
Total energy: -325821.0 ( -91.88 by residue)
QMean score : 0.502
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