Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTVYLSLGSNIGDRETFLKQALFSIDHLQKTKVAQISAIYETAAWGNTNQEDFFNICCQVETDLAPFELLDYCQEIEKRLKRVRH-EHWGPRTIDIDILLFGNQVINQEDLVVPHPYMTKRAFVLVPLLEIAPQLSLPNGSKLEDYL-----EKLNLGEVHYLKPVE
1F9H Chain:A ((1-156))
-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPATLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW---------
General information:
TITO was launched using:
RESULT:
Template:
1F9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119732 for 1174 contacts (-102.0/contact) +
2D Compatibility (PS) -16248 + (NN) -8670 + (LL) 744
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -161606.0 ( -137.65 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1F9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F9H-query.scw
PDB file :
Tito_Scwrl_1F9H.pdb
: