Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLT--DDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMP-HVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDI-IGVKPAEEYIFTVF--AMPVGSYFKG-GLTPTNFIVSKEYDRAAPNGT-GAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANFFGITKDNQFITPLSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDKFTEAGACGTAAVISP---IGGIQNGDDFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
1I1L Chain:C ((10-308)) | -----------------------------WFNGEMVRWEDAKVHVM--SHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNL--------TSAYIRPLIF-VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVG--------EGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95955 for 2312 contacts (-41.5/contact) +
2D Compatibility (PS) -30650 + (NN) -9798 + (LL) 1984
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -157669.0 ( -68.20 by residue)
QMean score : 0.446
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