Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLK-VDYKKNALISAKIYSKT---MNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSS----SSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
| 3C1D Chain:A ((9-161)) | ----------------------------------------------------------------PAYARLLDRAVRILAVRDHSEQELRRKLAAP---ATAEDYERVIAWCHEHGY-LDDSRFVARFIASRSRKGYGPARIRQELNQ---------KGISREATEKAMREADIDWAALARDQATRKYGEPLPTVFSEKVKIQRFLLY---RGYLMEDIQDIW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10633 for 905 contacts (11.7/contact) +
2D Compatibility (PS) -14382 + (NN) -4325 + (LL) 5376
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -5298.0 ( -5.85 by residue)
QMean score : 0.627
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