Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDFLVDGLTKSVGDKTVFSNVSFIIHSLDRIGIIGVNGTGKTTLLDVISGELGFDGDRSPFSSANDYKIAYLKQEPDFDDSQTILDTVLSSDLREMALIKEYELLLNHYEESKQSRLEKVMAEMDSLDAWSIESEVKTVLSKLGITD--LQLSVGELSGGLRRRVQLAQVLLND--ADLLLLDEPTNHLDIDTIAWLTNFLKNS---KKTVLFITHDRYFLDNVATRIFEL------DKAQITEYQGNYQDYVRLRAEQDERDAASLHKKKQLYKQELAWMRTQPQARATKQQARINRFQNLKNDLHQTSDTSDLEMTFETSRIGKKVINFENVSFSYPDKSILKDFNLLIQNKDRIGIVGDNGVGKSTLLNLI-VQDLQP----DSGNVSIGET------------------------IRVGYFSQQLHNMDGS----------------------------------------------------------------KRVINYLQEVADEV----KTSVGTTSVTELLEQFLFPRSTHGTQIAKLSGGEKKRLYLLKILIEK---PNVLLLDEPTNDLDIATLTVLENFLQGF---GGPVITVSHDRYFLDKVANKIIAF------EDNDIREFFGNYTDYLDEKAFNEQNNEVISKKESTKTSREKQSRKRMSYFEKQEWATIEDDIMILENTITRIENDMQTCGSDFTRLSDLQKELDAKNEALLEKYDRYEYLSELDT |
2VF7 Chain:A ((362-828)) | -------------------------------------------------------------------------------------------------------------------------------------------VLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKRGGNSLFVVEHDLDVIRR-ADWLVDVGPEAGEKGGEILY-SGPPEGLKHVPESQ--------------TG---QYLFA------------------D---R--HTE-----P--HTPREPAGWLELNGVTR-----NNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQ--GSARLGGDLAQITRLVRVDQKPIGRTPRSNMATYTGLFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADESAIFRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVDAGNTVIAVEHKMQVVA-ASDWVLDIGPGAGEDGGRLV-AQGTPAEVAQAAGSVTAPYLRAALR----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115922 for 2434 contacts (-47.6/contact) +
2D Compatibility (PS) -34352 + (NN) -5490 + (LL) 18572
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -152142.0 ( -62.51 by residue)
QMean score : 0.358
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