Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDFLVDGLTKSVGDKTVFSNVSFIIHSLDRIGIIGVNGTGKTTLLDVISGELGFDGDRSPFSSANDYKIAYLKQEPDFDDSQTILDTVLSSDLREMALIKEYELLLNHYEESKQSRLEKVMAEMDSLDAWSIESEVKTVLSKLGITD--LQLSVGELSGGLRRRVQLAQVLLND--ADLLLLDEPTNHLDIDTIAWLTNFLKNS---KKTVLFITHDRYFLDNVATRIFEL------DKAQITEYQGNYQDYVRLRAEQDERDAASLHKKKQLYKQELAWMRTQPQARATKQQARINRFQNLKNDLHQTSDTSDLEMTFETSRIGKKVINFENVSFSYPDKSILKDFNLLIQNKDRIGIVGDNGVGKSTLLNLI-VQDLQP----DSGNVSIGET------------------------IRVGYFSQQLHNMDGS----------------------------------------------------------------KRVINYLQEVADEV----KTSVGTTSVTELLEQFLFPRSTHGTQIAKLSGGEKKRLYLLKILIEK---PNVLLLDEPTNDLDIATLTVLENFLQGF---GGPVITVSHDRYFLDKVANKIIAF------EDNDIREFFGNYTDYLDEKAFNEQNNEVISKKESTKTSREKQSRKRMSYFEKQEWATIEDDIMILENTITRIENDMQTCGSDFTRLSDLQKELDAKNEALLEKYDRYEYLSELDT
2VF7 Chain:A ((362-828))-------------------------------------------------------------------------------------------------------------------------------------------VLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKRGGNSLFVVEHDLDVIRR-ADWLVDVGPEAGEKGGEILY-SGPPEGLKHVPESQ--------------TG---QYLFA------------------D---R--HTE-----P--HTPREPAGWLELNGVTR-----NNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQ--GSARLGGDLAQITRLVRVDQKPIGRTPRSNMATYTGLFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADESAIFRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVDAGNTVIAVEHKMQVVA-ASDWVLDIGPGAGEDGGRLV-AQGTPAEVAQAAGSVTAPYLRAALR-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115922 for 2434 contacts (-47.6/contact) +
2D Compatibility (PS) -34352 + (NN) -5490 + (LL) 18572
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -152142.0 ( -62.51 by residue)
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_2VF7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VF7-query.scw
PDB file : Tito_Scwrl_2VF7.pdb: