Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIGIIVVSHSKNIAQGVVDLISEVAKDVSITYVGGTEDG--EIGT------------------SFDQVQQIVEQ-NDKKTLLAFFDL-GSAKMNLELVADFSEK---NIIIN----SVPV--------VEGA-----YTAAALLQAGADLDSIQSQLAELTINK
1UN8 Chain:A ((51-185))
-----------------------------VAVISGGGSGHEPAHVGFIGKGMLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDNKHPRGIAGTILVHKIAGYF-AERGYNLATVLREAQYAASNT
General information:
TITO was launched using:
RESULT:
Template:
1UN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47420 for 616 contacts (-77.0/contact) +
2D Compatibility (PS) -10552 + (NN) -7503 + (LL) 2460
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -67815.0 ( -110.09 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_1UN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UN8-query.scw
PDB file :
Tito_Scwrl_1UN8.pdb
: