Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIFKRKKQVEMPLEKIPAH----IGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV
1UEH Chain:B ((17-241))
--------------------GCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPV----DLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER-----
General information:
TITO was launched using:
RESULT:
Template:
1UEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100695 for 1602 contacts (-62.9/contact) +
2D Compatibility (PS) -24104 + (NN) -12912 + (LL) 2248
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -157163.0 ( -98.10 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1UEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEH-query.scw
PDB file :
Tito_Scwrl_1UEH.pdb
: