Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAF-SFQAQRNGTLV-APP---LTNLRSITESQNTTLMMIITNLEN--QAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSG-G--------PPQAVSPIGPVRDVIEYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYT-----------DAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR |
| 4Q6T Chain:A ((4-340)) | -------------------------------------------------------------------------------------------------APFVLAYTD-GQVE--AS-YSNLQAFHRNLSAVGLGSTYGLTVTGKLRQDGMNETTQNIIRFAKSQSLPLYPTVSDYNEDIGAFDPAISHSILNDRALSAGTVKQLVKLAKEGGFAGINLDFEKVEPRNRAAFCAFVKTLGNALHASNKKLIISIPPKLSDTEP-EYLQGYDYKALGAAVDYFQVMTYDQVGPGWSSGGFHNEAWPGPESGFDWQQALLSYAVSRVPASKVLAGLPTYGQDYSIGNR-----VHWSAYQEIIAE---HRAAIHRDAASATPYATWGPVKSFVDGVEWTPERAQPVLWYDDAASIKTKTALVTRLGLGGTSVWAMGYENAGFWAALQSGLK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136549 for 2715 contacts (-50.3/contact) +
2D Compatibility (PS) -32677 + (NN) -6427 + (LL) 7368
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -185635.0 ( -68.37 by residue)
QMean score : 0.474
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