Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
3UXM Chain:D ((2-186))
--GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARG--RLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3UXM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70139 for 1428 contacts (-49.1/contact) +
2D Compatibility (PS) -20392 + (NN) -8695 + (LL) 2740
1D Compatibility (HY) -8800 + (ID) 4000
Total energy: -109286.0 ( -76.53 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3UXM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UXM-query.scw
PDB file :
Tito_Scwrl_3UXM.pdb
: