Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQQIEKFKADKKESKTQKTEQTDIGEGYDNLARLYQEGFHICNVHYGSVRKEDCLFCLSFLNKK
1DEB Chain:A ((1-54))
--------------------------AAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSI---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13784 for 210 contacts (65.6/contact) +
2D Compatibility (PS) -5947 + (NN) -2547 + (LL) 4288
1D Compatibility (HY) -2800 + (ID) 450
Total energy: 6328.0 ( 30.13 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1DEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DEB-query.scw
PDB file :
Tito_Scwrl_1DEB.pdb
: