Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MICQECHERPATFHFTKVVNGEKIEVHICEQCAKENSDSYGISANQGFSIHNLLSGLLNMDSSFQNAGTQMFSHSEQISACPKCGMTFQQFRKIGRFGCSECYKTFHSNITPILRKVHSGNTVHAGKIPKRIGGNLHVRRQIDMLKKELESLIHQEEFENAAHVRDQIRLLEQSLKSTDSEEEQE---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3WPA Chain:A ((65-410)) | NVAQGNQTNVGDALTALDNAINTAATTSKSTVSNGQNIVVSKSKN--ADGSDNYEVSTAKDLTVDSVKAG----DTVLNNAGITIGNNAVVLN---NTGLTISGGPSVTLAGIDAGNKT----IQNVANAVNATDAVNKGQLDSAINNVNNNVNELANNAVKYDDASKDKITLGGGATGTTITNVKDGTVAQGSKDAVNGGQLWNVQQQVDQNTTDISNIKNDINNGTVGLVQQAGKDAPVTVAKDTGGTTVNVAGTDGNRVVTGVKEGAVNATSKDAVNGSQLNTTNQAVVNYLGGGAGYDNITGSFTAPSYTVGDSKYNNVGGAIDALNQADQALNSKIDNVSNKLDNAFRITNNRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29790 for 771 contacts (38.6/contact) +
2D Compatibility (PS) -17543 + (NN) 5082 + (LL) 808
1D Compatibility (HY) 0 + (ID) 1400
Total energy: 16737.0 ( 21.71 by residue)
QMean score : 0.069
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