Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQVSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK---- |
2C1I Chain:A ((14-431)) | FEQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLESKDNLVFYYTEQEESGLKGVVNRNVTKQIYDIEETEKTSLGKVHLTEDGQPFTLDQLFSDASKAKEQLIKELTSFDLSAWNFDYKDSQIILYEIALPVSAFFDVIQSSYLL--EKDAALYQSYFDKKHQKVVALTFNDGPNPATTPQVLETLAKYDIK-ATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRN---SLDLSFIMWDVDSLDWKSKNEASILTEIQHQVANGSIVLMH--DIHSPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85718 for 1885 contacts (-45.5/contact) +
2D Compatibility (PS) -26055 + (NN) -6326 + (LL) 760
1D Compatibility (HY) -16400 + (ID) 3050
Total energy: -136789.0 ( -72.57 by residue)
QMean score : 0.506
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