Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MKGSLSEHKAG------NRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQN--------QIELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENAAETI--HISSLKPGTARVFMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKGFTEDQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL |
| 1JJF Chain:A ((11-265)) | SLPTMPPSGYDQVRNGVPRGQVVNISYFSTATNSTRPARVYLPPGYSKDKK-YSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD---------------GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERLFPDGGKAAREKLKLLFIACGTND---------SLIGFGQRVHEYCVANNI---NHVYWLIQGGGHDFNVWKPGLWNFLQMADEAGLTRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115011 for 1894 contacts (-60.7/contact) +
2D Compatibility (PS) -23570 + (NN) -9033 + (LL) 864
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -157600.0 ( -83.21 by residue)
QMean score : 0.448
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