Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTL-GITLAAAGQLITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAFVLP------------GYGWF---IAARIIMAMGAGVVV-----VTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLGRMIAVALGWKSV---FGAIALLGLIAMVVIFFTLPYTEGD----K--PVPLL-QQLALFKKRKVAMGLSITFFWLGGYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGM----TLHIVTLILLSLV-THSYIGVLVILILWSFAAWSTGPTQQFHLATIEP-EMSGVLLSMNQSMMQFAMAVGAGIGGVFVENVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ |
| 5AYN Chain:A ((8-416)) | ----RIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQVVKWGVWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDISVGNDLAPSLVAPEKLTHFNSWLRRIDLATEVGAPILAGALF-------PLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVLTEA-INLRGSFSDPIFWLILSYALLWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPYLVRRLGLISSSRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTEDFKYLVYVSLAAVLLA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343999 for 2818 contacts (-122.1/contact) +
2D Compatibility (PS) -35640 + (NN) -694 + (LL) 2680
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -391303.0 ( -138.86 by residue)
QMean score : 0.278
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