Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASS-GKPYPEELSSEQWILVMQKLAAHG-VADITLTG-GEAKLIKGFKELVVVASS--LFTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMDNTHDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTINESNADEVSDVVEQCANAGAFIFRAGKTLSVGRATEGFKAL-DIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 4M7T Chain:A ((21-270)) | -----------------------------------------------------------------------------------------------------MDKLFSMIEVEVNSQCNRTCWYCPNSVSKRKETGEMDPALYKTLMEQLSSLDFAGRISFHFYGEPLLCKNLDLFVGMTTEYIPRARPIIYTNGDFLTEKRLQTLTELGIQKFIVTQHA--GAKHKFRGVYDQLAGADKEKVVYLDHSDLVLSNRGGILDNIPANMSC--MVPSNLAVVTVLGNVLPCFEDFNQKMVMGNIGEQHISDIWHNDKFTSFRKMLK--EGHRGKSDLCKN-CNNVSVQTEEQYDYVL-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66408 for 1954 contacts (-34.0/contact) +
2D Compatibility (PS) -25160 + (NN) -7982 + (LL) 12468
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -95932.0 ( -49.10 by residue)
QMean score : 0.208
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