Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQLKWRTVNPEETKAIAKLTAAFAKPGDVLTLEGDLGAGKTTFTKGFAEGLGITRIVNSPTFTIIKEYNDGVLPLYHMDVYRMEDESEDLGLDEYFHGQGVCLVEWAHLIEEQLPQERLQIVIKRAGDDEREITFTAVGNRYEMLCEELSRHDNISN
5C78 Chain:A ((362-402))--------------KYLFKNLNLNIKKGEKIAFIGESGCGKSTLVDLIIGLLKPK-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 70 -11939 -170.55 -291.18
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -170.55
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.394

(partial model without unconserved sides chains):
PDB file : Tito_5C78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C78-query.scw
PDB file : Tito_Scwrl_5C78.pdb: