Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPGTG--TV------SAA-KDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
3E48 Chain:A ((1-210))MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYF-NQESMVEAFKGMDTVVFIPSIIHPS------FKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPF--HMSPY---FGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAI-


General information:
TITO was launched using:
RESULT:

Template: 3E48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 971 -138512 -142.65 -689.11
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -142.65
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_3E48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E48-query.scw
PDB file : Tito_Scwrl_3E48.pdb: