Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------MVEKCYSCLICGYKGL----IQNPLYKGEYQKT-FDICPCCGFEFGYSEDHDVRLGFIVT--PDHLI--EAAFQLYRKQWLESGMVIAHPEDIPEELKNGNCLKFEVLLKQLKKLNLDIENFEISGF---------------
4D0Y Chain:A ((1-184))AEVVNKGDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFP-ISDHYSGFRSYETQTKLYQDYVNQDGKEAADRYSARPGYSE-HQTGLAFDVIGTDGDLVTEEKAAQWLLDHAADYGFVVRYLKGKEKETG------YMAEEWHLRYVGKEAKEIAESGLSLEEYYGFEGGDYVD


General information:
TITO was launched using:
RESULT:

Template: 4D0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 376 3673 9.77 33.39
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 9.77
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_4D0Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D0Y-query.scw
PDB file : Tito_Scwrl_4D0Y.pdb: