Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKQVKCECGHINPVGTVLCESCGRALQETQPPLADMRYDGSARRSQTYNKTIIDKIWNFFSSVKVGIWLIVITLAASAFGTIFPQEAYLPPGAQADTYYKEQYGTFGQLYYLLGFHHLYGSWWYLLLIASIGISLVICSLDRVIPLYRALKNQGVRRSPAFLRRQRLFSETVTVLNGESKEKIVTLLKKKHYRIREKEGSILAEK---GRFSRWGPYVNHIGLIIFLIGAMLRFVPGMYVDETLWVREGETAAIPGTDGKYYLKN--NQFSVETYNSKTEKKVFADAIDR-----VGDGRVAKNFQTDAVLYKREGKIVYGEKPKLEKVTEEDIRVNQPLRFDSFSVYQVDYKENQLDQMVFQLIDKKTKKSFGSLKINLLDPDSVYDLGNGYKVEIASYLPDFYFNQDGEPSTKTKIPNNPAFVFNIITPDKPKGEKSFVAIQETIEGSGNNKYKLKFDHVETKNITG-LTVRKD----LTLWVLAVG---------------GAIFMIGVIQGMYWQHRRI-WLHSQDGAVMVAGHTNKNWF--GLKKDLAFILADSGLTEPVDQKELIKTQK---------------- 5CVL Chain:A ((27-578)) RRKVQVSYVIRDEVE-----------KYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDY---VKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNN--------TVTTSSLSGN-KDSIYSLAMNQL-------GTIIVSGSTEKVLRVWDP--RTCAKLMKLKG-HTDNVKALLLN-----RDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEG-VWALQVNDAFTHVYSGGRDRKIYCTD--LRNPDIRVLICE----EKAPVLKMELDRSA--DPPPAIWVATTKSTVNKWTLKGIHNFRAS--GPITPLCTQPDQVIKGGA--SIIQCHILND-------KRHILTKDTNNNVAYWDVL-KACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLK--TGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLE--YWPRTHVNPMDKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSG--GETESMLLNETVPQWVIDITVDKNMPKFN

General information: TITO was launched using: RESULT: Template: 5CVL.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2840 -9726 -3.42 -20.39 target 2D structure prediction score : 0.39 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -3.42 2D Compatibility (Sec. Struct. Predict.) : 0.39 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.120

(partial model without unconserved sides chains): PDB file : Tito_5CVL.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5CVL-query.scw PDB file : Tito_Scwrl_5CVL.pdb: