Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVET---------PYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLYES 4YMI Chain:B ((28-224)) -RRLGVMGGTFDPIHNGHLVAASEVADRFALDEVIFVPTGQPWQKQ-RKVSPAEHRYLMTVIATASNPRFTVSRADIDRGGATYTVDTLTDLRTAHPDADLYFITGADALASILSWENWEQLFTLAKFIGVSRPGYELSSDHIAHAELPPDGLSLVEVPALAISSTDCRIRAGQARPIWYLVPDGVVQYVAKHRLYSG

General information: TITO was launched using: RESULT: Template: 4YMI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 945 -96244 -101.84 -514.67 target 2D structure prediction score : 0.75 Monomeric hydrophicity matching model chain B : 0.80 3D Compatibility (PKB) : -101.84 2D Compatibility (Sec. Struct. Predict.) : 0.75 1D Compatibility (Hydrophobicity) : 0.80 QMean score : 0.563

(partial model without unconserved sides chains): PDB file : Tito_4YMI.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4YMI-query.scw PDB file : Tito_Scwrl_4YMI.pdb: