Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHLQLKKLLNHFFLEDIGTGDLTSQSIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLD----ENVQSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQIKICDTRKTTPGLRMLEKYAVRAGGGYNHRFGLYDGIMIKDNHIAACGSILEACKKARQAAGHMVNIEVEIETEEQLREAIAAGADVIMFDNCPPDTVRHFAKLTPAN---IKTEASGGITLESLPAFKGTGVNYISLGFLTHSVKSLDISMDVTLSNESVEECCYVNS
2B7Q Chain:B ((1-272))---MEIRTFLERALKEDLGHGDLFERVLEKDFKATAFVRAKQEGVFSGE---KYALELLEMTGIECVQTI---KDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKM---------------


General information:
TITO was launched using:
RESULT:

Template: 2B7Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1230 11277 9.17 42.55
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : 9.17
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_2B7Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B7Q-query.scw
PDB file : Tito_Scwrl_2B7Q.pdb: