Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVLKRIRDMFVASVHEGLDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLAFDAGEEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQALIARANAAKAKEHMNTTFDKIDSESAYREFLRIENRIE-EMEIRANYSKSAEAGTELTRKEFADDVEAEIEKMRTLSLQKSDQTKAANE
4UY3 Chain:A ((23-216))---------MRSNKRQIIEKAIERKNEIET--LPFDQNLAQLSK-LNLKGETKTKYDAMKKDNVESTNKYLAPVEEKIHNAEALLDK----------FSFNASQSEIDDANELMDSYEQSYQQQLEDVNEIIALYKDNDELYDKCKVDYREMKRDVLANRHQFGEAASLLETEIEKFEPRLEQYEVLKADGNYVQAHNHIAALNEQMKQLRSYMHG----------


General information:
TITO was launched using:
RESULT:

Template: 4UY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 572 7681 13.43 39.80
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 13.43
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_4UY3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UY3-query.scw
PDB file : Tito_Scwrl_4UY3.pdb: