Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLKATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASGGVSSVADLEALA---RNEADGVSGAIIGKALYTNQFTLSEALERVKRK
4X2R Chain:A ((3-241))-AMLTLLPAVDVADGKAVRLLQGEAGSETDY-GSPIEAARDWVEAGAEWIHLVDLDAAFGR-GSNAPLLERIVGEVGIKVELSGGIRDDASLTRALKAGAARVNLGTAALEDPQWTARVIAEHGEKIAVGLDVRGTTLAAR------GGDLWQTLDRLNEAGCRRYVVTDVTKDGTLTGPNTELLRQVAARTSAPVVASGGISSLEDIAALARLVP---QGVDSAIVGKALYNGNFTLPQALAVAG--


General information:
TITO was launched using:
RESULT:

Template: 4X2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1364 -94268 -69.11 -408.09
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -69.11
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.655

(partial model without unconserved sides chains):
PDB file : Tito_4X2R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X2R-query.scw
PDB file : Tito_Scwrl_4X2R.pdb: