Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIEKEAKKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGVPVVTIDRSAEQ-GKVETLVASDNVKGGEMAAAFIADKLGKGAKVAELEGVPGASATRERGSGFHNIA-DQKLQVVTKQS-ADFDRTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGK---DILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHGKK-VQKTISAPLKLETQK
4KQ9 Chain:A ((6-282))-----------------------------------AGKKVVYSTFGAQIPFFNRIGEGAKAQATVRRLDFDISTSEIDPGKQIDSIDNAVAQQPDGLIVSPIDGSALVPTIKGAVEDGVPVILLADGLSEDVGQLSFVGSDFAEIGRLKATYIADRLGDGGTVAMVNGTRGMSFVEEQGEAAREVFEERGIEIVDDVYTKAITPDEGLTATQNILTRHSDVGAIYYSGDDGALGGIRAIAARNIAPGKIMVVGTDANEGALAAVRAGTMALTVSQCAYEQGGIAIDVMADYLETGKKPDRRIFTPVIEIDTE


General information:
TITO was launched using:
RESULT:

Template: 4KQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1501 3818 2.54 14.14
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 2.54
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.609

(partial model without unconserved sides chains):
PDB file : Tito_4KQ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KQ9-query.scw
PDB file : Tito_Scwrl_4KQ9.pdb: