Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVWGATGPNQFDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHP-----GHVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
4XCM Chain:A ((126-234)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------DPESPLLRAVLRYLGVPYKYGANSPLALDCSAFVAQVYAELGVALPRTTKEQYQAFP--PVEAPRPGDLVFFSFGGKEVDHVGIYLGRGVFAHASSYGSRVVIESLEAPFY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44413 for 733 contacts (-60.6/contact) +
2D Compatibility (PS) -11721 + (NN) -5580 + (LL) 13268
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -57546.0 ( -78.51 by residue)
QMean score : 0.478
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