Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIPPEVHSGLLSAGCGPGSLLVAAQQWQELSDQYALACAELGQLLGEVQASSWQGTAATQ-YVAAHGPYLAWLEQTAINS-------AVTAAQHVAAAAAYCSALAAMPTPAELAANHAIHGVLIATNFFGINTVPIALNEADYVRMWLQAADTMAAYQAVADAATVAVPSTQPAPPIRAPGGDAADTRLDVLSSIGQLIRDIL-----DFIANPYKYFL-----EFF-----EQFGFSPAVTVVLALVALQLYDFLWYPYY------ASYGLLLLPFFTP------TLSALTALSALIHLLNLPPAGLLPIAAALGPGDQWGANLAVAVTPATAAVPGGSPPTSNPAPAAPSSNSVGSASAAPGISYAVPGLAPPGVSSGPKAGTKSPDTAADTLATAGAARPGLARAHRRKRSESGVGIRGYRDEFLDATATVDAATDVPAPANAAGSQGAGTLGFAGTAPTTSGAAAGMVQLSSH--------STSTTVPLLPTTWTTDAEQ |
| 3J9O Chain:B ((79-505)) | --VIDKLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGEPYGAILGLYNFENTTNDIIWLTGMGMVAKNS--HAPFIASIDKSFFGVKD----LSEITHIKS-FEALLEHPRYKEWNDFRN-----------------------LDVAAYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPA-SIHLVKNMMRSYDKTRWFQYIRGVESGGYVKNLVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVSEKG--------------------------TSNACF-----FSVNSAKKVE-----------EFVDGFDSANSRLIANLSYTMCISRISH--YIKCVIRDKIGSIVDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPHIQFEGMNTTMTIDTRLEPELFGTNN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140925 for 2717 contacts (-51.9/contact) +
2D Compatibility (PS) -39417 + (NN) 3801 + (LL) 2400
1D Compatibility (HY) -14400 + (ID) 3800
Total energy: -192341.0 ( -70.79 by residue)
QMean score : 0.088
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