Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGNYRERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAMP--PPIFVAASGPQSATLAGRYGDGWIAQ--ARDINDAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTAGAVDQPNPVEIQRAAESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFLHF------PQDDPITAIDFYRTNVLPELR--- |
| 1LUC Chain:A ((1-355)) | ------MKFGNFLL-------------------------TY-QPPELSQTEVMKRLVNLGKASEGC--GFDTVWLLEH---HFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPTA-HPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGT--DMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNPSAYTQGGAPVYVVAESASTTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATK-----IF-RIDYSYEINPVGTPEECIAIIQQDIDAT-GIDNICCGFEANGSEEEIIASMKLFQSDVMPYLKEKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127188 for 2569 contacts (-49.5/contact) +
2D Compatibility (PS) -33640 + (NN) -14872 + (LL) 620
1D Compatibility (HY) -6800 + (ID) 2550
Total energy: -184430.0 ( -71.79 by residue)
QMean score : 0.362
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