Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRFLTSIVAWLRAGYPEGIPPTDSFAVLALLCRRLSH-DEVKAVANELMRLGDFDQIDIGVVITHFTDELPSPEDVERVRARLAAQGWPLDDVRDREEHA
2V75 Chain:A ((6-94))
YTENLKVIVAEKLAGIPN--FNEDIKYVAEYIVLLIVNGGTVESVVDELASL--FDSVS--------RDTLANVVQTAFFALEALQQGESAENIVSKIRMM
General information:
TITO was launched using:
RESULT:
Template:
2V75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29237 for 636 contacts (-46.0/contact) +
2D Compatibility (PS) -9920 + (NN) -9553 + (LL) 632
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -52678.0 ( -82.83 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_2V75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V75-query.scw
PDB file :
Tito_Scwrl_2V75.pdb
: