Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELLLLTSELYP-DPVLPALSLLPHTVRTAPAEASS--LLEAGNADAVLVDARNDLSSGRGLCRLLSSTGRSIPVLAVVSEGGLV--AVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADPDDEDADPGRDGMQEPLVDPLRSQ
4S04 Chain:A ((2-219))
--KILVIEDDALLLQGLILAMQSEGYVCDGVSTAHEAALSLASNHYSLIVLDLGLPDEDGLHFLSRMRREKMTQPVLILTARDTLEDRISGLDTGADDYLVKPFALEELNARIRALLRRHNNQGD----NEISVGNLRLNVTRRLVWLGETALDLTPKEYALLSRLMMKAGSPVHREILYNDIYSGDNEPATNTLEVHIHNLREKIGK---SRIRTVRGFGYMLANN---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4S04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111977 for 1601 contacts (-69.9/contact) +
2D Compatibility (PS) -23684 + (NN) -14730 + (LL) 1268
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -162473.0 ( -101.48 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_4S04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S04-query.scw
PDB file :
Tito_Scwrl_4S04.pdb
: