Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKRLDLTDVNIYYGSFHAVADVSLAILPRSVTAFIGPSGCGKTTVLRTLNRMHEVIPGARVEGAVLLDDQDIYAPGIDPVGVRRAIGMVFQRPNPFPAMSIRNNVVAGLKLQGVRNRKVLDD----TAESSLRGANLWDEVKDRLDKPGGG----------LSGGQQQRLCIARAIAVQPDVLLMDEPCSSLDPISTMAIEDLISELKQQYTIVIVTHNMQQAARVSDQTAFFNLEAVGKPGRLVEIASTEKIFSNPNQKATEDYISGRFG
4AYT Chain:A ((362-567))---------------------DFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYD--PAS---GTISLDGHDIRQ--LNPVWLRSKIGTVSQEPILF-SCSIAENIAYGA-----------DDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNA-------NMVAVLDQGKITEYGKHEE-------------------


General information:
TITO was launched using:
RESULT:

Template: 4AYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78109 for 1431 contacts (-54.6/contact) +
2D Compatibility (PS) -20799 + (NN) -7225 + (LL) 4044
1D Compatibility (HY) -10800 + (ID) 3800
Total energy: -116689.0 ( -81.54 by residue)
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_4AYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYT-query.scw
PDB file : Tito_Scwrl_4AYT.pdb: