Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKRLDLTDVNIYYGSFHAVADVSLAILPRSVTAFIGPSGCGKTTVLRTLNRMHEVIPGARVEGAVLLDDQDIYAPGIDPVGVRRAIGMVFQRPNPFPAMSIRNNVVAGLKLQGVRNRKVLDD----TAESSLRGANLWDEVKDRLDKPGGG----------LSGGQQQRLCIARAIAVQPDVLLMDEPCSSLDPISTMAIEDLISELKQQYTIVIVTHNMQQAARVSDQTAFFNLEAVGKPGRLVEIASTEKIFSNPNQKATEDYISGRFG |
4AYT Chain:A ((362-567)) | ---------------------DFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYD--PAS---GTISLDGHDIRQ--LNPVWLRSKIGTVSQEPILF-SCSIAENIAYGA-----------DDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNA-------NMVAVLDQGKITEYGKHEE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78109 for 1431 contacts (-54.6/contact) +
2D Compatibility (PS) -20799 + (NN) -7225 + (LL) 4044
1D Compatibility (HY) -10800 + (ID) 3800
Total energy: -116689.0 ( -81.54 by residue)
QMean score : 0.395
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