Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVG-RGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITSHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
1ZUW Chain:A ((1-266))
--MLEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSP-IAPDHQFLTTGARDQFAKIADDWF-----HVECISL----
General information:
TITO was launched using:
RESULT:
Template:
1ZUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -231108 for 2351 contacts (-98.3/contact) +
2D Compatibility (PS) -28705 + (NN) -11664 + (LL) 476
1D Compatibility (HY) -23200 + (ID) 5400
Total energy: -299601.0 ( -127.44 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUW-query.scw
PDB file :
Tito_Scwrl_1ZUW.pdb
: