Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVG-EGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS |
1U7Z Chain:A ((4-223)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-PTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKI-----DELTIKMVKNPDIVAGVAALKD----H-RPYVVGFAAETN----NVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGD-KVLPLERKELLGQLLLDEIVTRYDEK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U7Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149669 for 1801 contacts (-83.1/contact) +
2D Compatibility (PS) -22674 + (NN) -8607 + (LL) 15320
1D Compatibility (HY) -14400 + (ID) 4250
Total energy: -184280.0 ( -102.32 by residue)
QMean score : 0.442
|
|
|