Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEVVLETLGTPKDT
1ZH4 Chain:A ((4-121))
---------------VLIVEDEQAIRRFLRTALEGDGMRVF-EAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSQ-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90267 for 920 contacts (-98.1/contact) +
2D Compatibility (PS) -13107 + (NN) -7072 + (LL) 6604
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -112842.0 ( -122.65 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1ZH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZH4-query.scw
PDB file :
Tito_Scwrl_1ZH4.pdb
: