Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYPLGEALLALYRWRGPLINAGVGGHGYTYLLGAEANRFVFANA-DAFSWSQTFESLVPVDGPTALIVSDGADHRRRRSVVAPGLRHHHVQ--RYVATMVSNIDTVIDGWQP--GQRLDIYQELRSAVRRSTAESLFGQRLAVHSDFLGEQ---LQPLLDLTRRP--PQVMRLQQR--VNSPGWRRAMAARKRIDDLIDAQIADARTAP--RPDDHMLTTLISGCSEE----GTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGG-RVPAADDLSALTYLNGVVHETLRLYSPGVI-SARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQRTH-RIRAA-NFAALRPWPGLTVEIRKSAPAQ |
| 3E6I Chain:A ((32-472)) | ----IPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRD-RGIIFNNGPTWKDIRRFSLTTLRNYG-GKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGK--FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPP-RYKLCVIPRS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232055 for 3440 contacts (-67.5/contact) +
2D Compatibility (PS) -43318 + (NN) -5771 + (LL) 488
1D Compatibility (HY) -18400 + (ID) 3750
Total energy: -302806.0 ( -88.02 by residue)
QMean score : 0.441
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