Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSVLGQ---PAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRD--------HRT---ARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTTVPAAG |
| 3NHB Chain:A ((67-264)) | -----------------------------RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDT-IADNIRYGRVTAGNDEVEA--AAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVV-AHRLSTVVNADQILVIKDG-------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -118047 for 1351 contacts (-87.4/contact) +
2D Compatibility (PS) -19624 + (NN) -3308 + (LL) 5148
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -147831.0 ( -109.42 by residue)
QMean score : 0.350
|
|
|