Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSIAQEHDCLLIDLDGTVFCGRQPTGGAVQSLSQVRS---RKLFVTNNASRSADEVAAHLCELGFTATGEDVVTSAQSAAHLLAGQLAPGARVLIVGTEALANEVAAVGLRPVRRFEDRPDAVVQGLSMTTGWSDLAEAALAIRAGALWVAANVDPTLPTERGLLPGNGSMVAALRTATGMDPRVAGKPAPALMTEAVARGD--FRAALVVGDRLDTDIEGANAAGLPSLMVLTGVNSAWDAVYAEPVRRPTYIGHDLRSLHQDSKLLAVAPQPGWQIDVGGGAVTVCANGDVDDLEFIDDGLSIVRAVASAVWEARAADLHQRPLRIEAGDERARAALQRWSLMRSDHPVTSVGTQ |
4KN8 Chain:A ((1-254)) | ----MRKYNGYLIDLDGTMYRGTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKLVSLDIPATPEQIFTSSMATANYVYDLD-QNAMIYFIGEEGLYKALKEKGFSFA---DENADVVIVGLDREVTYEKLAVACLAVRNGAKLISTNGDLALPTERGFMPGNGAFTALISHSTQVKATFVGKPEPIIMEQALKVLGTNKNETIMVGDNYDTDILAGIRAGLDTLLVHTGVTTVEKLK--EYKQQPTYSMKSLDDWKF---------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110698 for 2114 contacts (-52.4/contact) +
2D Compatibility (PS) -27982 + (NN) -13188 + (LL) 7364
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -165854.0 ( -78.46 by residue)
QMean score : 0.544
|
|
|