Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLER-FGIS---GTDLGIPWDNGDPANRQVLM---------------------IFGDTFGYCAVDGHQWR--YNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFS----------KQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDG-------EWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP |
| 1G9M Chain:G ((5-321)) | -------------------------------------------------------------------------------------------------------------------------------------------EVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVIT-QACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLL---NGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGHCNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSG--GDPEIVTHSFNCGGEFFYCNSTQLFNS-TWFN----GSDTITLPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNS-NNESEIFRPGGGD-------MRDNWRSELYKYKVVKIE------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29549 for 1729 contacts (17.1/contact) +
2D Compatibility (PS) -26691 + (NN) -3323 + (LL) 14020
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: 4455.0 ( 2.58 by residue)
QMean score : 0.094
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