Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSAC-----RIPLGDVL--GPAGVAHVTAEVTAIDADGRRVTTS--------------------TGASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGP--------LTSAAATVVVVGAGLTGIETACELPGRLHALFAR---GDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTL----SSG----ERLAAATVVWCAGMRASRLTEQ----LPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEHLSVMSCQHGRPMGRYAGCNVINDLF--D------------------QPLLALRIPWYVTVLDLGSAGAVYTEG-WERK-VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 4G6H Chain:A ((42-475)) | KPNVLILGSGWGAISFLKHIDTK---------KYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAG------LPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMI----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261301 for 3040 contacts (-86.0/contact) +
2D Compatibility (PS) -38503 + (NN) -1758 + (LL) 2140
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -315122.0 ( -103.66 by residue)
QMean score : 0.418
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