Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVRSHGALVRNRAN-----YLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQP-GIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPVQ-LTARVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIERPNAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVR---AAGAGSRRDTRVLRGWSTLPVTLGPARSMVSP
2CD8 Chain:B ((45-423))-------------------------------------AADPYPTYARLRAEGPAHRVRTPEGDEVWLVVGYDRARAVLADPRFSK-----------DWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPDDPA-------QAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRT--SDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAG-HLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPI-----------


General information:
TITO was launched using:
RESULT:

Template: 2CD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -217296 for 3042 contacts (-71.4/contact) +
2D Compatibility (PS) -39122 + (NN) -15317 + (LL) 4724
1D Compatibility (HY) -25600 + (ID) 6950
Total energy: -299561.0 ( -98.48 by residue)
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_2CD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CD8-query.scw
PDB file : Tito_Scwrl_2CD8.pdb: