Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDIGAPVTVQV-AVDPPYPVVIGTGLLDELEDLLA-D-RH-KVAVVHQPGLA-ETAEEIRKRLAGKGV--DAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRERY-RWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPD-ALPQLLEIMAGDKKTRAGVLRFVVLDG-LAKPGRMVGPDPGLLVTAYAGVCAP |
3ZOK Chain:A ((14-378)) | ------PTIVDVDLGDRSYPIYIGSGLLDQ-PDLLQRHVHGKRVLVVTNSTVAPIYLDKVVGALTNENPNVSVESVILPDGEKYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVVKYGLIRDANFFEWQEKNMPALMARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDESIVNRAHNILQQAKLPTAPPETMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLHAFCKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228420 for 3196 contacts (-71.5/contact) +
2D Compatibility (PS) -38618 + (NN) -15990 + (LL) 536
1D Compatibility (HY) -25600 + (ID) 6800
Total energy: -314892.0 ( -98.53 by residue)
QMean score : 0.532
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