Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDSGQLGAADTPLRLLSSVHYLTDGELPQLYDYPDDGTWLRANFISSLDGGATVDGTSGAMAGPGDRFVFNLLRELADVIVVGVGTVRIEGYSGVRMGVVQRQHRQARGQSEVPQLAIVTRSGRLD-RDMAVFTRTEMAPLVLTTTAVADDTRQRLAGLAEVIACSGDDPGTVDEAVLVSQLAAR-GLRRILTEGGPTLLGT-FVERDVLDELCLTIAPYVVGGLARRIVTGPGQVLTRMRCAHVLTDDSGYLYTRYVKT
4HA7 Chain:A ((8-242))
----------EDLPQFLQ--NYLPNAGQTENTIVP----FVTLTYAQSLDARVS--------RGPETKTMTHYLRHHHDGILVGSGTVLAD------------NPGLNCKWGNSPRPIIIDTKQKWRFDGSKMQELFIKRQGKPPIVVVTSEPIIKEQHVDYAICPINDTTKLVDWKKLFEILKEEFNIRSVMVEGGANVINQLLLRSDIVNSLIITIGSTFLGSSGTEVSPPQT---VNLKDMSWWKGITDVVLCARLA-
General information:
TITO was launched using:
RESULT:
Template:
4HA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106025 for 1691 contacts (-62.7/contact) +
2D Compatibility (PS) -24052 + (NN) -12533 + (LL) 1436
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -151774.0 ( -89.75 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_4HA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HA7-query.scw
PDB file :
Tito_Scwrl_4HA7.pdb
: