Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGPEHGSASTIEILPVIGLPEFRPGDDLSAAVAAAAPWLRDGDVVVVTSKVVSKCEGRLVPAPEDPEQRDRLRRKLIEDEAVRVLARKDRTLITENRLGLVQAAAGVDGSNVGRSELALLPVDPDASAATLRAGLRERLGVTVAVVITDTMGRAWRNGQTDAAVGAAGLAVLRNYAGVRDPYGNELVVTEVAVADEIAAAADLVKGKLTATPVAVVRGFGVSDDGSTARQLLRPGANDLFWLGTAEALELGRQQAQLLRRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLDRMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTDAEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIGYADEPSG--LRDPVPAADLLILK |
3GE5 Chain:A ((26-193)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFRLI----EDFFRTRRSVRKFIDRPVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREEEGRKRLAPCS-----------------------QQPWFPGAPIYIITLGDHQRAWKR-------GAGDSVDIDTSIAMTYMMLEAHSLGLGCTWVCA--FDQALCSEIFDIPSHMTPVSILALGYGDPTVPPREAFNRKTIEEVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101665 for 1199 contacts (-84.8/contact) +
2D Compatibility (PS) -17992 + (NN) -12611 + (LL) 17900
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -123318.0 ( -102.85 by residue)
QMean score : 0.469
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