Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRDAPCEPVPIRTPLA-ETVGSRLT--KPPLLVPVLRAGLGMVDEAHAALPEAHVGFVGVARDEQTHQPVP-------YLDSLPDDLTDV-PVMVLDPMVATGGSMTHTLGLLISRGAADITVLCVVAAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFGPR
1XTT Chain:B ((2-216))
-PLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASR-------VPKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG--
General information:
TITO was launched using:
RESULT:
Template:
1XTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165505 for 1582 contacts (-104.6/contact) +
2D Compatibility (PS) -21107 + (NN) -4938 + (LL) 392
1D Compatibility (HY) -19600 + (ID) 3650
Total energy: -214408.0 ( -135.53 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1XTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XTT-query.scw
PDB file :
Tito_Scwrl_1XTT.pdb
: