Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEA-ATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAI---AALPDAVRSPDLIALSQLICRREC |
| 3OYR Chain:A ((20-343)) | ------------KSGSVDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLI-----------AAGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDVV---------VAAHLIWGGAQSVLVGDFLFARAFELMVETNS----MKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDY-------------------ATLPLLLAIARSGPREAEFWERAIG-----TEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212678 for 2405 contacts (-88.4/contact) +
2D Compatibility (PS) -31154 + (NN) -18862 + (LL) 2716
1D Compatibility (HY) -10400 + (ID) 3950
Total energy: -274328.0 ( -114.07 by residue)
QMean score : 0.438
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