Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAP---VSVSATTTDGLGLTGRGEGLAAIATALVVSLR
3P10 Chain:B ((25-178))
-----RIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV---
General information:
TITO was launched using:
RESULT:
Template:
3P10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141559 for 1267 contacts (-111.7/contact) +
2D Compatibility (PS) -16747 + (NN) -11488 + (LL) 532
1D Compatibility (HY) -8000 + (ID) 3150
Total energy: -180412.0 ( -142.39 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3P10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P10-query.scw
PDB file :
Tito_Scwrl_3P10.pdb
: