Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDLKLLREN--PDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVGGAS--PEE-RPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGED--DYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGA-KVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEG--DGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPA--DAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRYRDAS--GKPQIAATLNGTL-ATTRWLVAILENHQRPDGSVRVPDALVPFVGVEVLEPVA |
| 3LSS Chain:A ((7-468)) | VLDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEACVLQLKQLSKDLSDQVAGLAKEAQQLEEERDKLMLNVGNILHESVPIAQDEETGNTVVRTFGNTTK-RAKLNHVSIMERLGMMDTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGDGDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLRQNVKEYCHMLNGTLCAITRTMCCICENYQTEEG-VVIPDVLRPYMMGIEMIR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120430 for 3373 contacts (-35.7/contact) +
2D Compatibility (PS) -45032 + (NN) -22590 + (LL) 484
1D Compatibility (HY) -32000 + (ID) 7300
Total energy: -226868.0 ( -67.26 by residue)
QMean score : 0.448
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