Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDA-ATLAQEAGNFERISGDLKT-QIDQVESTAGSLQGQWRGAAGT-AAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF--
4LWS Chain:A ((35-134))
QSAVDRAAMA---QAAQDIEQSANAIRGMQ-NQLASAKDQLRSHWEGDA-SMAFEAVFNRFNEDFSRVLKALDGMHESLVQTRITYEAREEAAQQSVNRVQALLN
General information:
TITO was launched using:
RESULT:
Template:
4LWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12922 for 460 contacts (28.1/contact) +
2D Compatibility (PS) -10332 + (NN) -2573 + (LL) 404
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -5179.0 ( -11.26 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_4LWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LWS-query.scw
PDB file :
Tito_Scwrl_4LWS.pdb
: